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The fluorescence laboratory.
  • Home
  • About
    • Experience and research interests
    • Publications
  • Blackboard
    • For Developers - Information on GUI Structures etc.
    • Fun with MATLAB
      • How to interact with Origin/OriginPro from within MATLAB
      • How to make your MATLAB application automatically check for updates
    • How to cite software from FluorTools.com
    • How to turn off text zooming in Windows
    • Installing the software
      • Installing and running compiled MATLAB applications
      • Installing and running MATLAB Apps
      • Installing and running the programs in MATLAB
      • Troubleshooting: Common installation issues
    • logo
    • Make a donation
    • Online feedback form
    • PhD thesis LaTeX template
    • Scientific poster templates
    • Step-by-step tutorial of an abstract scientific illustration
      • 1. Create DNA molecular structure file using w3DNA
      • 2. Position the dyes within the DNA molecule using Avogadro
      • 3. Visualize the DNA + dyes using VMD
      • 4. Render the molecule using POV-Ray
      • 5. Add glare using Adobe Illustrator
      • 6. Create glowing waves with arrowheads using Adobe Illustrator
      • 7. Create 3D arrows with color gradient using Adobe Illustrator
      • 8. Create cone using Adobe Illustrator
      • 9. Add light source and surface reflections in Adobe Illustrator
      • Finish: Add 3D arrow depth effect using Paint Shop Pro
    • Terms and conditions
    • Wish for a new simulation and data analysis software
  • Documentation
    • Spectral overlap integral page moved
  • News and updates
    • AniFit updated to version 1.3
    • a|e updated to 2.1
    • a|e updated to 2.2
    • a|e updated to version 1.2
    • a|e upgraded to 2.0
    • FluorFit updated to version 1.3 and is now called DecayFit
    • Presenting iSMS: single-molecule FRET microscopy software
    • Subscribe to announcements from FluorTools.com
    • Welcome to the announcement page
  • Software
    • AniFit - Anisotropy Decay Analysis
      • AniFit Documentation Pages
        • Analyse fluorescence anisotropy decays
        • Format input data
        • Load data
        • The G-factor
    • a|e - UV-Vis-IR Spectral Software
      • a|e Documentation Pages
        • a|e's Spectral Tools
          • Calculate Resonance Energy Transfer (FRET) Efficiencies
          • Calculate spectral overlap integral in FRET
          • Decompose spectra with multiple components
          • Fit Gaussian to spectral band
          • Integrate absorption and emission spectra
          • Quantum yields
          • Raman peaks in emission spectra
          • Scatter in UV-Vis absorption spectra
          • Singular value decomposition (SVD)
        • Calculate fluorescence quantum yield
        • Create synthetic spectra
          • Create Gaussian spectrum
          • UV-Vis absorption reaction curves
        • Custom operations: Navigating the command board of a|e
        • Data import and export
          • Download absorption and emission spectra from online database
          • Export figures
          • Export spectra to ASCII
          • Format input data
          • Import data from Origin project
          • Import spectra from other a|e sessions
          • Load absorption and emission spectra
        • Edit data
          • Duplicate dataset
          • Rename spectra
        • Edit plot
          • Change graph color permanently
          • Lock axis scales
          • Set axis titles
        • Edit spectra
          • Add or multiply multiple spectra
          • Add or multiply spectrum by a constant
          • Manually edit spectra
          • Normalize spectra
          • Red-shift or blue-shift spectra
          • Subtract background emission
          • Subtract baseline from absorption spectrum
          • Subtract or divide multiple spectra
        • IR spectra
          • Flipping between transmittance and absorbance
          • Label peaks in IR spectra
        • Navigate figure window
          • Tutorial video: Navigating the a|e graph window
        • Questions & Answers
          • How do I move the legend?
        • Sessions
          • Open session
          • Save session
        • Visualization tools
          • Plot trends
    • DecayFit - Fluorescence Decay Analysis
      • DecayFit Documentation Pages
        • Fit fluorescence intensity decays
        • Fluorescence intensity decay models
        • Format input data
        • Format input data in version 1.2 and earlier
        • Load data
    • FRETmatrix - Simulation of FRET
    • imageA - Image Analysis Software
The fluorescence laboratory.
  • Home
  • About
    • Experience and research interests
    • Publications
  • Blackboard
    • For Developers - Information on GUI Structures etc.
    • Fun with MATLAB
      • How to interact with Origin/OriginPro from within MATLAB
      • How to make your MATLAB application automatically check for updates
    • How to cite software from FluorTools.com
    • How to turn off text zooming in Windows
    • Installing the software
      • Installing and running compiled MATLAB applications
      • Installing and running MATLAB Apps
      • Installing and running the programs in MATLAB
      • Troubleshooting: Common installation issues
    • logo
    • Make a donation
    • Online feedback form
    • PhD thesis LaTeX template
    • Scientific poster templates
    • Step-by-step tutorial of an abstract scientific illustration
      • 1. Create DNA molecular structure file using w3DNA
      • 2. Position the dyes within the DNA molecule using Avogadro
      • 3. Visualize the DNA + dyes using VMD
      • 4. Render the molecule using POV-Ray
      • 5. Add glare using Adobe Illustrator
      • 6. Create glowing waves with arrowheads using Adobe Illustrator
      • 7. Create 3D arrows with color gradient using Adobe Illustrator
      • 8. Create cone using Adobe Illustrator
      • 9. Add light source and surface reflections in Adobe Illustrator
      • Finish: Add 3D arrow depth effect using Paint Shop Pro
    • Terms and conditions
    • Wish for a new simulation and data analysis software
  • Documentation
    • Spectral overlap integral page moved
  • News and updates
    • AniFit updated to version 1.3
    • a|e updated to 2.1
    • a|e updated to 2.2
    • a|e updated to version 1.2
    • a|e upgraded to 2.0
    • FluorFit updated to version 1.3 and is now called DecayFit
    • Presenting iSMS: single-molecule FRET microscopy software
    • Subscribe to announcements from FluorTools.com
    • Welcome to the announcement page
  • Software
    • AniFit - Anisotropy Decay Analysis
      • AniFit Documentation Pages
        • Analyse fluorescence anisotropy decays
        • Format input data
        • Load data
        • The G-factor
    • a|e - UV-Vis-IR Spectral Software
      • a|e Documentation Pages
        • a|e's Spectral Tools
          • Calculate Resonance Energy Transfer (FRET) Efficiencies
          • Calculate spectral overlap integral in FRET
          • Decompose spectra with multiple components
          • Fit Gaussian to spectral band
          • Integrate absorption and emission spectra
          • Quantum yields
          • Raman peaks in emission spectra
          • Scatter in UV-Vis absorption spectra
          • Singular value decomposition (SVD)
        • Calculate fluorescence quantum yield
        • Create synthetic spectra
          • Create Gaussian spectrum
          • UV-Vis absorption reaction curves
        • Custom operations: Navigating the command board of a|e
        • Data import and export
          • Download absorption and emission spectra from online database
          • Export figures
          • Export spectra to ASCII
          • Format input data
          • Import data from Origin project
          • Import spectra from other a|e sessions
          • Load absorption and emission spectra
        • Edit data
          • Duplicate dataset
          • Rename spectra
        • Edit plot
          • Change graph color permanently
          • Lock axis scales
          • Set axis titles
        • Edit spectra
          • Add or multiply multiple spectra
          • Add or multiply spectrum by a constant
          • Manually edit spectra
          • Normalize spectra
          • Red-shift or blue-shift spectra
          • Subtract background emission
          • Subtract baseline from absorption spectrum
          • Subtract or divide multiple spectra
        • IR spectra
          • Flipping between transmittance and absorbance
          • Label peaks in IR spectra
        • Navigate figure window
          • Tutorial video: Navigating the a|e graph window
        • Questions & Answers
          • How do I move the legend?
        • Sessions
          • Open session
          • Save session
        • Visualization tools
          • Plot trends
    • DecayFit - Fluorescence Decay Analysis
      • DecayFit Documentation Pages
        • Fit fluorescence intensity decays
        • Fluorescence intensity decay models
        • Format input data
        • Format input data in version 1.2 and earlier
        • Load data
    • FRETmatrix - Simulation of FRET
    • imageA - Image Analysis Software
  • More
    • Home
    • About
      • Experience and research interests
      • Publications
    • Blackboard
      • For Developers - Information on GUI Structures etc.
      • Fun with MATLAB
        • How to interact with Origin/OriginPro from within MATLAB
        • How to make your MATLAB application automatically check for updates
      • How to cite software from FluorTools.com
      • How to turn off text zooming in Windows
      • Installing the software
        • Installing and running compiled MATLAB applications
        • Installing and running MATLAB Apps
        • Installing and running the programs in MATLAB
        • Troubleshooting: Common installation issues
      • logo
      • Make a donation
      • Online feedback form
      • PhD thesis LaTeX template
      • Scientific poster templates
      • Step-by-step tutorial of an abstract scientific illustration
        • 1. Create DNA molecular structure file using w3DNA
        • 2. Position the dyes within the DNA molecule using Avogadro
        • 3. Visualize the DNA + dyes using VMD
        • 4. Render the molecule using POV-Ray
        • 5. Add glare using Adobe Illustrator
        • 6. Create glowing waves with arrowheads using Adobe Illustrator
        • 7. Create 3D arrows with color gradient using Adobe Illustrator
        • 8. Create cone using Adobe Illustrator
        • 9. Add light source and surface reflections in Adobe Illustrator
        • Finish: Add 3D arrow depth effect using Paint Shop Pro
      • Terms and conditions
      • Wish for a new simulation and data analysis software
    • Documentation
      • Spectral overlap integral page moved
    • News and updates
      • AniFit updated to version 1.3
      • a|e updated to 2.1
      • a|e updated to 2.2
      • a|e updated to version 1.2
      • a|e upgraded to 2.0
      • FluorFit updated to version 1.3 and is now called DecayFit
      • Presenting iSMS: single-molecule FRET microscopy software
      • Subscribe to announcements from FluorTools.com
      • Welcome to the announcement page
    • Software
      • AniFit - Anisotropy Decay Analysis
        • AniFit Documentation Pages
          • Analyse fluorescence anisotropy decays
          • Format input data
          • Load data
          • The G-factor
      • a|e - UV-Vis-IR Spectral Software
        • a|e Documentation Pages
          • a|e's Spectral Tools
            • Calculate Resonance Energy Transfer (FRET) Efficiencies
            • Calculate spectral overlap integral in FRET
            • Decompose spectra with multiple components
            • Fit Gaussian to spectral band
            • Integrate absorption and emission spectra
            • Quantum yields
            • Raman peaks in emission spectra
            • Scatter in UV-Vis absorption spectra
            • Singular value decomposition (SVD)
          • Calculate fluorescence quantum yield
          • Create synthetic spectra
            • Create Gaussian spectrum
            • UV-Vis absorption reaction curves
          • Custom operations: Navigating the command board of a|e
          • Data import and export
            • Download absorption and emission spectra from online database
            • Export figures
            • Export spectra to ASCII
            • Format input data
            • Import data from Origin project
            • Import spectra from other a|e sessions
            • Load absorption and emission spectra
          • Edit data
            • Duplicate dataset
            • Rename spectra
          • Edit plot
            • Change graph color permanently
            • Lock axis scales
            • Set axis titles
          • Edit spectra
            • Add or multiply multiple spectra
            • Add or multiply spectrum by a constant
            • Manually edit spectra
            • Normalize spectra
            • Red-shift or blue-shift spectra
            • Subtract background emission
            • Subtract baseline from absorption spectrum
            • Subtract or divide multiple spectra
          • IR spectra
            • Flipping between transmittance and absorbance
            • Label peaks in IR spectra
          • Navigate figure window
            • Tutorial video: Navigating the a|e graph window
          • Questions & Answers
            • How do I move the legend?
          • Sessions
            • Open session
            • Save session
          • Visualization tools
            • Plot trends
      • DecayFit - Fluorescence Decay Analysis
        • DecayFit Documentation Pages
          • Fit fluorescence intensity decays
          • Fluorescence intensity decay models
          • Format input data
          • Format input data in version 1.2 and earlier
          • Load data
      • FRETmatrix - Simulation of FRET
      • imageA - Image Analysis Software

Documentation

a|e Documentation Pages

DecayFit Documentation Pages

AniFit Documentation Pages

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